Sequence Similarity Clusters for the Entities in PDB 1GMB

Entity #1 | Chains: A
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 14464
95 % 4 7 11193 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 7 11045
70 % 5 8 9553
50 % 5 8 8641
40 % 19 30 1851
30 % 21 32 1589

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures