Sequence Similarity Clusters for the Entities in PDB 1GMB

Entity #1 | Chains: A
CYTOCHROME C3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 13987
95 % 4 7 10844 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 4 7 10695
70 % 5 8 9280
50 % 5 8 8397
40 % 19 30 1789
30 % 21 32 1537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures