Sequence Similarity Clusters for the Entities in PDB 1GM9

Entity #1 | Chains: A
PENICILLIN G ACYLASE ALPHA SUBUNIT protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2266
95 % 2 21 2687
90 % 2 21 2733
70 % 2 21 2712
50 % 2 22 2541
40 % 2 22 2519
30 % 2 22 2356
Entity #2 | Chains: B
PENICILLIN G ACYLASE BETA SUBUNIT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9183
95 % 5 24 2177
90 % 5 24 2235
70 % 5 26 1595
50 % 5 27 1597
40 % 5 29 1516
30 % 5 29 1482

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.