Sequence Similarity Clusters for the Entities in PDB 1GM8

Entity #1 | Chains: A
PENICILLIN G ACYLASE ALPHA SUBUNIT protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 20 2309
95 % 4 21 2740
90 % 4 21 2788
70 % 4 21 2769
50 % 4 22 2605
40 % 4 22 2570
30 % 4 22 2405
Entity #2 | Chains: B
PENICILLIN G ACYLASE BETA SUBUNIT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 23476
95 % 7 24 2214
90 % 7 24 2277
70 % 7 26 1625
50 % 7 27 1623
40 % 7 29 1540
30 % 7 29 1512

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.