Sequence Similarity Clusters for the Entities in PDB 1GLI

Entity #1 | Chains: A,C
DEOXYHEMOGLOBIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43323
95 % 235 239 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 236 240 35
70 % 314 321 18
50 % 715 730 5
40 % 720 735 9
30 % 1153 1175 8
Entity #2 | Chains: B,D
DEOXYHEMOGLOBIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 155 158 53
95 % 236 239 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 241 244 31
70 % 328 335 14
50 % 716 730 5
40 % 721 735 9
30 % 1154 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.