Sequence Similarity Clusters for the Entities in PDB 1GLE

Entity #1 | Chains: F
GLUCOSE-SPECIFIC PROTEIN IIIGlc protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 3368
95 % 7 12 4138 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 7 12 4167
70 % 8 13 3153
50 % 8 13 3084
40 % 10 16 2620
30 % 10 16 2466
Entity #2 | Chains: G
GLYCEROL KINASE protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 4169
95 % 7 13 1759 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.0
PDBFlex
90 % 7 13 1793
70 % 7 13 1817
50 % 16 27 803
40 % 23 39 529
30 % 23 39 530

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.