Sequence Similarity Clusters for the Entities in PDB 1GLD

Entity #1 | Chains: F
GLUCOSE-SPECIFIC PROTEIN IIIGlc protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 12 3292
95 % 5 12 4051 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 5 12 4077
70 % 6 13 3086
50 % 6 13 3015
40 % 8 16 2561
30 % 8 16 2411
Entity #2 | Chains: G
GLYCEROL KINASE protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 4041
95 % 5 13 1721 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.9
PDBFlex
90 % 5 13 1753
70 % 5 13 1777
50 % 13 27 782
40 % 19 37 551
30 % 19 37 552

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.