Sequence Similarity Clusters for the Entities in PDB 1GLB

Entity #1 | Chains: F
GLUCOSE-SPECIFIC PROTEIN IIIGlc protein, length: 168 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 3408
95 % 8 12 4182 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 8 12 4210
70 % 9 13 3176
50 % 9 13 3102
40 % 11 16 2640
30 % 11 16 2484
Entity #2 | Chains: G
GLYCEROL KINASE protein, length: 501 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 4221
95 % 8 13 1772
90 % 8 13 1807
70 % 8 13 1833
50 % 17 27 812
40 % 26 39 537
30 % 26 39 535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.