Sequence Similarity Clusters for the Entities in PDB 1GL6

Entity #1 | Chains: A,B,D,E,F,G
ATPASE protein, length: 436 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 1109
95 % 3 5 1490 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 5 1523
70 % 3 5 1532
50 % 3 5 1585
40 % 3 5 1602
30 % 3 5 1573

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1E9R 1 A, B, D, E, F, G CONJUGAL TRANSFER PROTEIN TRWB TRANSMEMBRANE-ANCHOR-EXCISED PROTEIN 562
2 1E9S 1 A, B, D, E, F, G, H, I, J, K, L, M CONJUGAL TRANSFER PROTEIN TRWB TWO HOMOHEXAMERS ARE PRESENT IN THE A.U. TRANSMEMBRANE-ANCHOR-EXCISED PROTEIN 562
3 1GL6 1 A, B, D, E, F, G ATPASE COMPLEX WITH GDPNP. CYTOSOLIC FRAGMENT 562
4 1GKI 1 A, B, D, E, F, G CONJUGAL TRANSFER PROTEIN TRWB COMPLEX WITH ADP AND MG2+. CYTOSOLIC, RESIDUES 71-507 562
5 1GL7 1 A, B, D, E, F, G CONJUGAL TRANSFER PROTEIN TRWB COMPLEX WITH ADPNP. CYTOSOLIC FRAGMENT, RESIDUES 71-507 562