Sequence Similarity Clusters for the Entities in PDB 1GL2

Entity #1 | Chains: A
ENDOBREVIN protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71850
95 % 1 1 49910
90 % 1 1 47386
70 % 1 1 41605
50 % 1 1 35472
40 % 1 1 31233
30 % 1 1 26356
Entity #2 | Chains: B
SYNTAXIN 7 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71851
95 % 1 1 49911
90 % 1 1 47387
70 % 1 1 41606
50 % 1 1 35473
40 % 1 1 31234
30 % 3 23 1372
Entity #3 | Chains: C
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-LIKE 1 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71852
95 % 1 1 49912
90 % 1 1 47388
70 % 1 1 41607
50 % 1 1 35474
40 % 1 1 31235
30 % 1 1 26357
Entity #4 | Chains: D
SYNTAXIN 8 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71853
95 % 1 1 49913
90 % 1 1 47389
70 % 1 1 41608
50 % 1 1 35475
40 % 1 1 31236
30 % 2 22 1282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.