Sequence Similarity Clusters for the Entities in PDB 1GL2

Entity #1 | Chains: A
ENDOBREVIN protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70805
95 % 1 1 49113
90 % 1 1 46646
70 % 1 1 41071
50 % 1 1 35098
40 % 1 1 30920
30 % 1 1 26094
Entity #2 | Chains: B
SYNTAXIN 7 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70806
95 % 1 1 49114
90 % 1 1 46647
70 % 1 1 41072
50 % 1 1 35099
40 % 1 1 30921
30 % 3 21 1432
Entity #3 | Chains: C
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-LIKE 1 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70807
95 % 1 1 49115
90 % 1 1 46648
70 % 1 1 41073
50 % 1 1 35100
40 % 1 1 30922
30 % 1 1 26095
Entity #4 | Chains: D
SYNTAXIN 8 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70808
95 % 1 1 49116
90 % 1 1 46649
70 % 1 1 41074
50 % 1 1 35101
40 % 1 1 30923
30 % 2 20 1328

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.