Sequence Similarity Clusters for the Entities in PDB 1GL2

Entity #1 | Chains: A
ENDOBREVIN protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73861
95 % 1 1 51195
90 % 1 1 48538
70 % 1 1 42547
50 % 1 1 36249
40 % 1 1 31907
30 % 1 1 26921
Entity #2 | Chains: B
SYNTAXIN 7 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73862
95 % 1 1 51196
90 % 1 1 48539
70 % 1 1 42548
50 % 1 1 36250
40 % 1 1 31908
30 % 3 23 1410
Entity #3 | Chains: C
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-LIKE 1 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73863
95 % 1 1 51197
90 % 1 1 48540
70 % 1 1 42549
50 % 1 1 36251
40 % 1 1 31909
30 % 1 1 26922
Entity #4 | Chains: D
SYNTAXIN 8 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73864
95 % 1 1 51198
90 % 1 1 48541
70 % 1 1 42550
50 % 1 1 36252
40 % 1 1 31910
30 % 2 22 1324

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures