Sequence Similarity Clusters for the Entities in PDB 1GL2

Entity #1 | Chains: A
ENDOBREVIN protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72726
95 % 1 1 50483
90 % 1 1 47900
70 % 1 1 42014
50 % 1 1 35818
40 % 1 1 31535
30 % 1 1 26621
Entity #2 | Chains: B
SYNTAXIN 7 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72727
95 % 1 1 50484
90 % 1 1 47901
70 % 1 1 42015
50 % 1 1 35819
40 % 1 1 31536
30 % 3 23 1383
Entity #3 | Chains: C
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-LIKE 1 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72728
95 % 1 1 50485
90 % 1 1 47902
70 % 1 1 42016
50 % 1 1 35820
40 % 1 1 31537
30 % 1 1 26622
Entity #4 | Chains: D
SYNTAXIN 8 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72729
95 % 1 1 50486
90 % 1 1 47903
70 % 1 1 42017
50 % 1 1 35821
40 % 1 1 31538
30 % 2 22 1296

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.