Sequence Similarity Clusters for the Entities in PDB 1GL2

Entity #1 | Chains: A
ENDOBREVIN protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74679
95 % 1 1 51747
90 % 1 1 49043
70 % 1 1 42976
50 % 1 1 36610
40 % 1 1 32228
30 % 1 1 27195
Entity #2 | Chains: B
SYNTAXIN 7 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74680
95 % 1 1 51748
90 % 1 1 49044
70 % 1 1 42977
50 % 1 1 36611
40 % 1 1 32229
30 % 3 23 1428
Entity #3 | Chains: C
VESICLE TRANSPORT V-SNARE PROTEIN VTI1-LIKE 1 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74681
95 % 1 1 51749
90 % 1 1 49045
70 % 1 1 42978
50 % 1 1 36612
40 % 1 1 32230
30 % 1 1 27196
Entity #4 | Chains: D
SYNTAXIN 8 protein, length: 65 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74682
95 % 1 1 51750
90 % 1 1 49046
70 % 1 1 42979
50 % 1 1 36613
40 % 1 1 32231
30 % 2 22 1338

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures