Sequence Similarity Clusters for the Entities in PDB 1GL1

Entity #1 | Chains: A,B,C
ALPHA-CHYMOTRYPSIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 26 979
95 % 14 26 1183 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 14 26 1206
70 % 14 26 1231
50 % 14 26 1268
40 % 1272 1885 4
30 % 1279 1899 7
Entity #2 | Chains: I,J,K
PROTEASE INHIBITOR LCMI II protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 20554
95 % 1 2 18588 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 18092
70 % 4 10 5347
50 % 4 10 4949
40 % 4 10 4654
30 % 4 10 4184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures