Sequence Similarity Clusters for the Entities in PDB 1GL1

Entity #1 | Chains: A,B,C
ALPHA-CHYMOTRYPSIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 26 835
95 % 14 26 1150 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 14 26 1173
70 % 14 26 1202
50 % 14 26 1257
40 % 1265 1863 4
30 % 1273 1885 6
Entity #2 | Chains: I,J,K
PROTEASE INHIBITOR LCMI II protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25587
95 % 1 2 21788 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 2 21152
70 % 4 10 5383
50 % 4 10 5128
40 % 4 10 4841
30 % 4 10 4428

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures