Sequence Similarity Clusters for the Entities in PDB 1GL0

Entity #1 | Chains: E
CHYMOTRYPSINOGEN A protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 26 951
95 % 23 26 1157 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 23 26 1177
70 % 23 26 1213
50 % 23 26 1258
40 % 1725 1873 4
30 % 1735 1887 7
Entity #2 | Chains: I
PROTEASE INHIBITOR LCMI I protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64407
95 % 1 1 52264
90 % 1 1 49552
70 % 5 10 5297
50 % 5 10 4898
40 % 5 10 4610
30 % 5 10 4280

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures