Sequence Similarity Clusters for the Entities in PDB 1GKU

Entity #1 | Chains: B
REVERSE GYRASE protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25825
95 % 1 2 21977 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 2.1
PDBFlex
90 % 1 2 21328
70 % 1 2 19565
50 % 1 2 16989
40 % 1 7 5747
30 % 1 7 5174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1GKU 1 B REVERSE GYRASE 2234
2 1GL9 1 B, C REVERSE GYRASE ADENYLYLIMIDODIPHOSPHATE (ADPNP) 2234