Sequence Similarity Clusters for the Entities in PDB 1GKU

Entity #1 | Chains: B
REVERSE GYRASE protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24994
95 % 1 2 21330 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 2.1
PDBFlex
90 % 1 2 20727
70 % 1 2 19032
50 % 1 2 16545
40 % 1 7 5593
30 % 1 7 5031

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures