Sequence Similarity Clusters for the Entities in PDB 1GKQ

Entity #1 | Chains: A,B,C,D
HYDANTOINASE protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6160
95 % 2 2 6806 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 2 6786
70 % 2 2 6614
50 % 2 2 6152
40 % 29 39 570
30 % 39 53 425

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures