Sequence Similarity Clusters for the Entities in PDB 1GKM

Entity #1 | Chains: A
HISTIDINE AMMONIA-LYASE protein, length: 509 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32032
95 % 1 6 7543 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 6 7491
70 % 1 6 7296
50 % 1 6 6725
40 % 1 6 6264
30 % 1 23 683

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures