Sequence Similarity Clusters for the Entities in PDB 1GKL

Entity #1 | Chains: A,B
ENDO-1,4-BETA-XYLANASE Y protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 8364
95 % 4 9 3614 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 9 3668
70 % 4 9 3608
50 % 4 9 3520
40 % 4 9 3399
30 % 4 9 3169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.