Sequence Similarity Clusters for the Entities in PDB 1GKK

Entity #1 | Chains: A,B
ENDO-1,4-BETA-XYLANASE Y protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6960
95 % 5 9 3637 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 9 3692
70 % 5 9 3629
50 % 5 9 3538
40 % 5 9 3419
30 % 5 9 3184

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.