Sequence Similarity Clusters for the Entities in PDB 1GKF

Entity #1 | Chains: A
PENICILLIN G ACYLASE ALPHA SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 26660
95 % 2 3 22307
90 % 2 3 21666
70 % 2 3 19877
50 % 2 3 17242
40 % 2 3 15385
30 % 2 3 13156
Entity #2 | Chains: B
PENICILLIN G ACYLASE BETA SUBUNIT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24872
95 % 2 24 2359
90 % 2 24 2422
70 % 2 26 1724
50 % 2 27 1709
40 % 2 29 1613
30 % 2 29 1586

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.