Sequence Similarity Clusters for the Entities in PDB 1GKF

Entity #1 | Chains: A
PENICILLIN G ACYLASE ALPHA SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 25766
95 % 2 3 21543
90 % 2 3 20941
70 % 2 3 19297
50 % 2 3 16780
40 % 2 3 14980
30 % 2 3 12813
Entity #2 | Chains: B
PENICILLIN G ACYLASE BETA SUBUNIT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24013
95 % 2 24 2276
90 % 2 24 2343
70 % 2 26 1663
50 % 2 27 1663
40 % 2 29 1572
30 % 2 29 1544

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.