Sequence Similarity Clusters for the Entities in PDB 1GKF

Entity #1 | Chains: A
PENICILLIN G ACYLASE ALPHA SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 24672
95 % 2 3 20643
90 % 2 3 20066
70 % 2 3 18511
50 % 2 3 16129
40 % 2 3 14413
30 % 2 3 12331
Entity #2 | Chains: B
PENICILLIN G ACYLASE BETA SUBUNIT protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 22997
95 % 2 24 2172
90 % 2 24 2231
70 % 2 26 1591
50 % 2 27 1593
40 % 2 29 1512
30 % 2 29 1479

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.