Sequence Similarity Clusters for the Entities in PDB 1GKD

Entity #1 | Chains: A,B
92 KDA TYPE IV COLLAGENASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 2356
95 % 14 18 1419
90 % 14 18 1443
70 % 14 18 1468
50 % 142 225 95
40 % 145 229 117
30 % 145 229 129

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.