Sequence Similarity Clusters for the Entities in PDB 1GKD

Entity #1 | Chains: A,B
92 KDA TYPE IV COLLAGENASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 2292
95 % 14 18 1373
90 % 14 18 1401
70 % 14 18 1425
50 % 140 223 94
40 % 143 227 113
30 % 143 227 126

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.