Sequence Similarity Clusters for the Entities in PDB 1GKC

Entity #1 | Chains: A,B
92 KDA TYPE IV COLLAGENASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24918
95 % 17 19 1496
90 % 17 19 1521
70 % 17 19 1530
50 % 172 237 104
40 % 175 241 126
30 % 175 241 139

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures