Sequence Similarity Clusters for the Entities in PDB 1GKC

Entity #1 | Chains: A,B
92 KDA TYPE IV COLLAGENASE protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 44001
95 % 16 18 1543
90 % 16 18 1578
70 % 16 18 1577
50 % 167 232 100
40 % 170 236 122
30 % 170 236 130

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures