Sequence Similarity Clusters for the Entities in PDB 1GK8

Entity #1 | Chains: A,C,E,G
RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAIN protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 1002
95 % 1 13 323
90 % 2 33 162
70 % 2 40 158
50 % 2 46 168
40 % 2 55 141
30 % 2 84 117
Entity #2 | Chains: I,K,M,O
RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 585
95 % 1 11 386
90 % 1 11 415
70 % 1 13 389
50 % 2 33 223
40 % 2 38 207
30 % 2 38 217

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.