Sequence Similarity Clusters for the Entities in PDB 1GK8

Entity #1 | Chains: A,C,E,G
RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAIN protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 1066
95 % 1 13 341
90 % 2 34 164
70 % 2 41 162
50 % 2 48 172
40 % 2 57 144
30 % 2 87 115
Entity #2 | Chains: I,K,M,O
RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1 protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 620
95 % 1 11 424
90 % 1 11 456
70 % 1 13 402
50 % 2 33 232
40 % 2 38 218
30 % 2 38 228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.