Sequence Similarity Clusters for the Entities in PDB 1GK6

Entity #1 | Chains: A,B
VIMENTIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31072
95 % 1 1 26978 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 1 25991
70 % 1 1 23514
50 % 1 1 20173
40 % 1 1 17812
30 % 1 1 14923

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures