Sequence Similarity Clusters for the Entities in PDB 1GK6

Entity #1 | Chains: A,B
VIMENTIN protein, length: 59 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48695
95 % 1 1 36372 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 1.3
PDBFlex
90 % 1 1 34750
70 % 1 1 30904
50 % 1 1 26423
40 % 1 1 23330
30 % 1 4 9696

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.