Sequence Similarity Clusters for the Entities in PDB 1GJQ

Entity #1 | Chains: A,B
NITRITE REDUCTASE protein, length: 543 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 3177
95 % 3 10 3437 Flexibility: Low
Max RMSD: 6.8, Avg RMSD: 1.3
PDBFlex
90 % 3 10 3492
70 % 3 10 3454
50 % 16 23 1291
40 % 16 23 1304
30 % 16 23 1282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures