Sequence Similarity Clusters for the Entities in PDB 1GJC

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 20 2097
95 % 9 20 2731
90 % 9 20 2775
70 % 9 20 2748
50 % 9 20 2707
40 % 9 20 2673
30 % 9 20 2495
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 15 3405
95 % 33 111 290
90 % 33 111 306
70 % 33 111 345
50 % 33 111 408
40 % 33 122 369
30 % 694 1765 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.