Sequence Similarity Clusters for the Entities in PDB 1GJB

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 20 2058
95 % 19 20 2683
90 % 19 20 2727
70 % 19 20 2703
50 % 19 20 2656
40 % 19 20 2618
30 % 19 20 2448
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 15 3355
95 % 67 111 282
90 % 67 111 293
70 % 67 111 335
50 % 67 111 396
40 % 67 122 359
30 % 1029 1753 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.