Sequence Similarity Clusters for the Entities in PDB 1GJA

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 20 2131
95 % 2 20 2774
90 % 2 20 2819
70 % 2 20 2788
50 % 2 20 2749
40 % 2 20 2715
30 % 2 20 2529
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 15 3452
95 % 13 111 297
90 % 13 111 312
70 % 13 111 352
50 % 13 111 415
40 % 13 122 378
30 % 370 1811 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.