Sequence Similarity Clusters for the Entities in PDB 1GJ9

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 20 2011
95 % 10 20 2625
90 % 10 20 2666
70 % 10 20 2641
50 % 10 20 2594
40 % 10 20 2568
30 % 10 20 2397
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 3282
95 % 34 111 277
90 % 34 111 288
70 % 34 111 320
50 % 34 111 356
40 % 34 122 340
30 % 692 1747 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.