Sequence Similarity Clusters for the Entities in PDB 1GJ9

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 20 2057
95 % 10 20 2679
90 % 10 20 2724
70 % 10 20 2700
50 % 10 20 2654
40 % 10 20 2616
30 % 10 20 2446
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 3351
95 % 34 111 281
90 % 34 111 292
70 % 34 111 335
50 % 34 111 396
40 % 34 122 358
30 % 695 1753 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.