Sequence Similarity Clusters for the Entities in PDB 1GJ9

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 20 2096
95 % 10 20 2728
90 % 10 20 2773
70 % 10 20 2747
50 % 10 20 2704
40 % 10 20 2670
30 % 10 20 2493
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 15 3401
95 % 34 111 290
90 % 34 111 306
70 % 34 111 343
50 % 34 111 408
40 % 34 122 367
30 % 700 1763 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.