Sequence Similarity Clusters for the Entities in PDB 1GJ8

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 20 2111
95 % 4 20 2748
90 % 4 20 2792
70 % 4 20 2761
50 % 4 20 2723
40 % 4 20 2692
30 % 4 20 2514
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 3430
95 % 20 111 293
90 % 20 111 308
70 % 20 111 348
50 % 20 111 409
40 % 20 122 372
30 % 478 1777 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.