Sequence Similarity Clusters for the Entities in PDB 1GJ5

Entity #1 | Chains: L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 335 45
95 % 99 336 60
90 % 99 336 65
70 % 99 338 76
50 % 99 338 101
40 % 99 338 125
30 % 99 338 137
Entity #2 | Chains: H
THROMBIN protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 88 290 55
95 % 103 374 35
90 % 103 381 38
70 % 103 405 43
50 % 103 405 78
40 % 668 1683 4
30 % 700 1832 6
Entity #3 | Chains: I
ACETYL HIRUDIN protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.