Sequence Similarity Clusters for the Entities in PDB 1GIR

Entity #1 | Chains: A
IOTA TOXIN COMPONENT IA protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 9743
95 % 5 9 6423 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 9 6401
70 % 5 9 6249
50 % 5 9 5833
40 % 9 14 3811
30 % 11 18 2233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.