Sequence Similarity Clusters for the Entities in PDB 1GIR

Entity #1 | Chains: A
IOTA TOXIN COMPONENT IA protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 10175
95 % 5 9 6735 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 9 6711
70 % 5 9 6553
50 % 5 9 6095
40 % 9 14 3970
30 % 11 18 2334

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures