Sequence Similarity Clusters for the Entities in PDB 1GIR

Entity #1 | Chains: A
IOTA TOXIN COMPONENT IA protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 7375
95 % 5 9 7587 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 5 9 7529
70 % 5 9 7318
50 % 5 9 6754
40 % 9 14 4199
30 % 11 18 2455

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures