Sequence Similarity Clusters for the Entities in PDB 1GIQ

Entity #1 | Chains: A,B
IOTA TOXIN COMPONENT IA protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 7846
95 % 2 9 8024 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 9 7955
70 % 2 9 7716
50 % 2 9 7084
40 % 4 14 4410
30 % 5 18 2540

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures