Sequence Similarity Clusters for the Entities in PDB 1GIQ

Entity #1 | Chains: A,B
IOTA TOXIN COMPONENT IA protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 9 7434
95 % 2 9 7629 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 2 9 7578
70 % 2 9 7372
50 % 2 9 6790
40 % 4 14 4224
30 % 5 18 2464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures