Sequence Similarity Clusters for the Entities in PDB 1GIK

Entity #1 | Chains: A
ANTIVIRAL PROTEIN S protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 19930
95 % 3 5 14075 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 3 5 13854
70 % 9 18 2288
50 % 9 18 2270
40 % 10 19 2172
30 % 70 208 213

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.