Sequence Similarity Clusters for the Entities in PDB 1GIG

Entity #1 | Chains: L
IGG1-KAPPA HC19 FAB (LIGHT CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 12717
95 % 11 39 444
90 % 13 45 387
70 % 843 2280 1
50 % 1726 4619 1
40 % 1726 4619 1
30 % 1943 5440 1
Entity #2 | Chains: H
IGG1-KAPPA HC19 FAB (HEAVY CHAIN) protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 20726
95 % 1 4 18084
90 % 3 9 7633
70 % 834 2238 2
50 % 1727 4619 1
40 % 1727 4619 1
30 % 1944 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.