Sequence Similarity Clusters for the Entities in PDB 1GI8

Entity #1 | Chains: A
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 20 2008
95 % 12 20 2618
90 % 12 20 2660
70 % 12 20 2636
50 % 12 20 2589
40 % 12 20 2563
30 % 12 20 2391
Entity #2 | Chains: B
UROKINASE-TYPE PLASMINOGEN ACTIVATOR protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 15 3272
95 % 38 111 277
90 % 38 111 288
70 % 38 111 320
50 % 38 111 356
40 % 38 122 340
30 % 739 1747 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.