Sequence Similarity Clusters for the Entities in PDB 1GHV

Entity #1 | Chains: L
THROMBIN protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 126 329 44
95 % 126 330 60
90 % 126 330 65
70 % 126 332 76
50 % 126 332 101
40 % 126 332 125
30 % 126 332 136
Entity #2 | Chains: H
THROMBIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 111 284 55
95 % 133 368 37
90 % 133 375 38
70 % 133 399 44
50 % 133 399 78
40 % 806 1623 4
30 % 859 1765 6
Entity #3 | Chains: I
ACETYL HIRUDIN protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.