Sequence Similarity Clusters for the Entities in PDB 1GHQ

Entity #1 | Chains: A
COMPLEMENT C3 protein, length: 308 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 16 1048
95 % 5 16 1451
90 % 5 16 1482
70 % 7 18 1274
50 % 7 18 1330
40 % 7 18 1363
30 % 7 18 1337
Entity #2 | Chains: B,C
CR2/CD121/C3D/EPSTEIN-BARR VIRUS RECEPTOR protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20039
95 % 2 5 9245
90 % 2 5 9140
70 % 2 5 8687
50 % 2 5 7925
40 % 2 5 7305
30 % 7 43 651

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.