Sequence Similarity Clusters for the Entities in PDB 1GHQ

Entity #1 | Chains: A
COMPLEMENT C3 protein, length: 308 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 16 1064
95 % 5 16 1473
90 % 5 16 1505
70 % 7 18 1293
50 % 7 18 1353
40 % 7 18 1384
30 % 7 18 1359
Entity #2 | Chains: B,C
CR2/CD121/C3D/EPSTEIN-BARR VIRUS RECEPTOR protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20358
95 % 2 5 9417
90 % 2 5 9310
70 % 2 5 8848
50 % 2 5 8072
40 % 2 5 7425
30 % 7 48 571

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.