Sequence Similarity Clusters for the Entities in PDB 1GHQ

Entity #1 | Chains: A
COMPLEMENT C3 protein, length: 308 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 16 1089
95 % 5 16 1515
90 % 5 16 1552
70 % 7 18 1324
50 % 7 18 1383
40 % 7 18 1403
30 % 7 18 1380
Entity #2 | Chains: B,C
CR2/CD121/C3D/EPSTEIN-BARR VIRUS RECEPTOR protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20714
95 % 2 5 9588
90 % 2 5 9473
70 % 2 5 9002
50 % 2 5 8206
40 % 2 5 7545
30 % 7 48 583

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.