Sequence Similarity Clusters for the Entities in PDB 1GGY

Entity #1 | Chains: A,B
PROTEIN (COAGULATION FACTOR XIII) protein, length: 731 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 4783
95 % 11 13 2491 Flexibility: High
Max RMSD: 20.4, Avg RMSD: 10.3
PDBFlex
90 % 11 13 2554
70 % 11 13 2545
50 % 11 13 2524
40 % 11 13 2482
30 % 15 27 1130

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures