Sequence Similarity Clusters for the Entities in PDB 1GGY

Entity #1 | Chains: A,B
PROTEIN (COAGULATION FACTOR XIII) protein, length: 731 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 5796
95 % 8 9 3274 Flexibility: Medium
Max RMSD: 20.2, Avg RMSD: 5.2
PDBFlex
90 % 8 9 3327
70 % 8 9 3288
50 % 8 9 3219
40 % 8 9 3133
30 % 12 22 1241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.