Sequence Similarity Clusters for the Entities in PDB 1GGY

Entity #1 | Chains: A,B
PROTEIN (COAGULATION FACTOR XIII) protein, length: 731 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 4636
95 % 11 13 2422 Flexibility: High
Max RMSD: 20.4, Avg RMSD: 10.3
PDBFlex
90 % 11 13 2492
70 % 11 13 2484
50 % 11 13 2461
40 % 11 13 2425
30 % 15 26 1175

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures