Sequence Similarity Clusters for the Entities in PDB 1GGX

Entity #1 | Chains: A,B,C,D
PROTEIN (FLUORESCENT PROTEIN FP583) protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4913
95 % 3 7 1475 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 10 1178
70 % 26 39 414
50 % 92 186 19
40 % 96 192 21
30 % 273 486 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.