Sequence Similarity Clusters for the Entities in PDB 1GGX

Entity #1 | Chains: A,B,C,D
PROTEIN (FLUORESCENT PROTEIN FP583) protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5148
95 % 3 7 1531 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 10 1222
70 % 26 41 424
50 % 96 194 19
40 % 100 200 25
30 % 297 521 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures