Sequence Similarity Clusters for the Entities in PDB 1GGX

Entity #1 | Chains: A,B,C,D
PROTEIN (FLUORESCENT PROTEIN FP583) protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 5572
95 % 3 7 1596 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 3 10 1282
70 % 26 42 432
50 % 97 198 20
40 % 101 203 32
30 % 301 530 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures