Sequence Similarity Clusters for the Entities in PDB 1GGU

Entity #1 | Chains: A,B
PROTEIN (COAGULATION FACTOR XIII) protein, length: 731 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 4588
95 % 6 13 2389 Flexibility: Medium
Max RMSD: 20.2, Avg RMSD: 5.2
PDBFlex
90 % 6 13 2459
70 % 6 13 2459
50 % 6 13 2436
40 % 6 13 2397
30 % 7 26 1165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures