Sequence Similarity Clusters for the Entities in PDB 1GGT

Entity #1 | Chains: A,B
COAGULATION FACTOR XIII protein, length: 731 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 5808
95 % 9 9 3279 Flexibility: Medium
Max RMSD: 20.2, Avg RMSD: 5.2
PDBFlex
90 % 9 9 3333
70 % 9 9 3296
50 % 9 9 3226
40 % 9 9 3141
30 % 19 22 1243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.