Sequence Similarity Clusters for the Entities in PDB 1GGQ

Entity #1 | Chains: A,B,C,D
OUTER SURFACE PROTEIN C protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21944
95 % 1 1 18983 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 18485
70 % 2 2 8927
50 % 3 3 6938
40 % 4 5 2871
30 % 4 5 2683

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.