Sequence Similarity Clusters for the Entities in PDB 1GGQ

Entity #1 | Chains: A,B,C,D
OUTER SURFACE PROTEIN C protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 20156
95 % 1 1 17442
90 % 1 1 17000
70 % 2 2 8210
50 % 3 3 6401
40 % 4 5 2645
30 % 4 5 2477

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.