Sequence Similarity Clusters for the Entities in PDB 1GGQ

Entity #1 | Chains: A,B,C,D
OUTER SURFACE PROTEIN C protein, length: 174 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22229
95 % 1 1 19208 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 18703
70 % 2 2 9015
50 % 3 3 7021
40 % 4 5 2902
30 % 4 5 2715

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures