Sequence Similarity Clusters for the Entities in PDB 1GGP

Entity #1 | Chains: A
PROTEIN (LECTIN 1 A CHAIN) protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55969
95 % 1 1 41286
90 % 1 1 39334
70 % 1 1 34789
50 % 3 4 11662
40 % 152 170 282
30 % 193 212 231
Entity #2 | Chains: B
PROTEIN (LECTIN 1 B CHAIN) protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47060
95 % 1 1 39104
90 % 1 1 37287
70 % 1 1 33059
50 % 17 26 2258
40 % 35 48 1190
30 % 35 48 1181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures