Sequence Similarity Clusters for the Entities in PDB 1GGP

Entity #1 | Chains: A
PROTEIN (LECTIN 1 A CHAIN) protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59954
95 % 1 1 42235
90 % 1 1 40301
70 % 1 1 35669
50 % 3 4 11863
40 % 63 79 622
30 % 191 210 213
Entity #2 | Chains: B
PROTEIN (LECTIN 1 B CHAIN) protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58923
95 % 1 1 41728
90 % 1 1 39836
70 % 1 1 35300
50 % 16 25 2244
40 % 34 47 1184
30 % 34 47 1166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures