Sequence Similarity Clusters for the Entities in PDB 1GGO

Entity #1 | Chains: A
PROTEIN (PYRUVATE, PHOSPHATE DIKINASE) protein, length: 873 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51546
95 % 5 7 10421 Flexibility: Medium
Max RMSD: 11.8, Avg RMSD: 4.4
PDBFlex
90 % 5 7 10294
70 % 5 7 9761
50 % 6 14 3286
40 % 6 14 3198
30 % 6 14 2998

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures