Sequence Similarity Clusters for the Entities in PDB 1GGM

Entity #1 | Chains: A,B
Glycine--tRNA ligase protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17666
95 % 2 2 16099 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 2 2 15797
70 % 2 2 14784
50 % 2 2 13034
40 % 2 2 11781
30 % 2 2 10228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures