Sequence Similarity Clusters for the Entities in PDB 1GGM

Entity #1 | Chains: A,B
Glycine--tRNA ligase protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17140
95 % 2 2 15630 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 2 2 15328
70 % 2 2 14326
50 % 2 2 12654
40 % 2 2 11442
30 % 2 2 9928

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.