Sequence Similarity Clusters for the Entities in PDB 1GGM

Entity #1 | Chains: A,B
Glycine--tRNA ligase protein, length: 442 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 17761
95 % 2 2 16360 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.3
PDBFlex
90 % 2 2 16013
70 % 3 3 10893
50 % 3 3 9780
40 % 3 3 8850
30 % 20 26 1248

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures