Sequence Similarity Clusters for the Entities in PDB 1GGL

Entity #1 | Chains: A,B
PROTEIN (CELLULAR RETINOL-BINDING PROTEIN III) protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44055
95 % 1 1 33105 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 31663
70 % 1 1 28324
50 % 43 50 598
40 % 170 205 151
30 % 566 737 21

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.