Sequence Similarity Clusters for the Entities in PDB 1GGE

Entity #1 | Chains: A,B,C,D
PROTEIN (CATALASE HPII) protein, length: 753 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 3082
95 % 29 42 235 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 29 42 247
70 % 29 42 277
50 % 29 42 306
40 % 36 59 218
30 % 36 59 228

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures