Sequence Similarity Clusters for the Entities in PDB 1GGD

Entity #1 | Chains: A
GAMMA CHYMOTRYPSIN protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
GAMMA CHYMOTRYPSIN protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 38 761
95 % 3 38 1053
90 % 3 38 1072
70 % 3 40 1068
50 % 3 40 1111
40 % 3 42 1089
30 % 3 50 929
Entity #3 | Chains: C
GAMMA CHYMOTRYPSIN protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 38 762
95 % 3 38 1055
90 % 3 38 1074
70 % 3 40 1073
50 % 3 43 1046
40 % 3 52 918
30 % 3 52 901

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.