Sequence Similarity Clusters for the Entities in PDB 1GGB

Entity #1 | Chains: L
IGG2A-KAPPA 50.1 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 20131
95 % 23 39 741
90 % 46 83 247
70 % 1161 1803 2
50 % 2838 4435 1
40 % 2838 4435 1
30 % 3286 5225 1
Entity #2 | Chains: H
IGG2A-KAPPA 50.1 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38941
95 % 3 3 17456
90 % 13 13 3634
70 % 1372 2145 1
50 % 2839 4435 1
40 % 2839 4435 1
30 % 3287 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.