Sequence Similarity Clusters for the Entities in PDB 1GGB

Entity #1 | Chains: L
IGG2A-KAPPA 50.1 FAB (LIGHT CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 19802
95 % 18 34 902
90 % 41 77 267
70 % 1141 1765 2
50 % 2794 4337 1
40 % 2794 4337 1
30 % 3228 5109 1
Entity #2 | Chains: H
IGG2A-KAPPA 50.1 FAB (HEAVY CHAIN) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38351
95 % 3 3 17166
90 % 13 13 3577
70 % 1350 2096 1
50 % 2795 4337 1
40 % 2795 4337 1
30 % 3229 5109 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.