Sequence Similarity Clusters for the Entities in PDB 1GG5

Entity #1 | Chains: A,B,C,D
NAD(P)H DEHYDROGENASE [QUINONE] 1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 533
95 % 11 16 605 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 11 16 633
70 % 12 18 611
50 % 12 18 655
40 % 12 18 689
30 % 12 18 686

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.