Sequence Similarity Clusters for the Entities in PDB 1GG2

Entity #1 | Chains: A
G PROTEIN GI ALPHA 1 protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34766
95 % 22 45 746 Flexibility: Low
Max RMSD: 9.7, Avg RMSD: 1.7
PDBFlex
90 % 23 51 583
70 % 31 66 401
50 % 31 77 423
40 % 33 97 360
30 % 34 99 351
Entity #2 | Chains: B
G PROTEIN GI BETA 1 protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 30 1187
95 % 8 35 1354 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 8 35 1381
70 % 8 35 1399
50 % 9 36 1375
40 % 9 38 1325
30 % 9 38 1301
Entity #3 | Chains: G
G PROTEIN GI GAMMA 2 protein, length: 71 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 25 1746
95 % 2 25 2286 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.1
PDBFlex
90 % 2 25 2351
70 % 2 25 2347
50 % 2 25 2324
40 % 2 25 2312
30 % 2 25 2208

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.