Sequence Similarity Clusters for the Entities in PDB 1GG2

Entity #1 | Chains: A
G PROTEIN GI ALPHA 1 protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35209
95 % 22 45 763 Flexibility: Low
Max RMSD: 9.7, Avg RMSD: 1.7
PDBFlex
90 % 23 51 594
70 % 31 66 406
50 % 31 77 434
40 % 33 97 384
30 % 34 99 371
Entity #2 | Chains: B
G PROTEIN GI BETA 1 protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 33 1071
95 % 8 38 1245 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 8 38 1272
70 % 8 38 1307
50 % 9 39 1300
40 % 9 41 1259
30 % 9 41 1232
Entity #3 | Chains: G
G PROTEIN GI GAMMA 2 protein, length: 71 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 28 1510
95 % 2 28 2023 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.1
PDBFlex
90 % 2 28 2072
70 % 2 28 2085
50 % 2 28 2089
40 % 2 28 2092
30 % 2 28 2015

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures